CDS

Accession Number TCMCG051C35123
gbkey CDS
Protein Id XP_024438440.1
Location join(3460059..3462195,3462292..3462866,3462972..3463079,3463162..3463262,3463365..3463455,3463542..3463652,3463734..3463799,3465228..3465287,3465431..3465988,3467436..3467555,3468046..3468165,3468260..3468325)
Gene LOC7454021
GeneID 7454021
Organism Populus trichocarpa

Protein

Length 1370aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024582672.1
Definition eukaryotic translation initiation factor 5B isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category J
Description eukaryotic translation initiation factor
KEGG_TC -
KEGG_Module M00161        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko00194        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K02703        [VIEW IN KEGG]
ko:K03243        [VIEW IN KEGG]
EC 1.10.3.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00195        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
map00195        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0001882        [VIEW IN EMBL-EBI]
GO:0001883        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0002183        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003743        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005525        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008135        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019001        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0032549        [VIEW IN EMBL-EBI]
GO:0032550        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032561        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033290        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070993        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGAAAGAAGCCAGCCGCGCGTGATGAGGAGAACGCTCCTGCGGGTGGTGGAGGGAAGTCGAAGAAGAAGGGGTTGATGATTGATGATGATGAGTATTCGGTTGGGACCGAGTTGTCCGAGGAGACACAGGTTCAGGAGGAGAAAGTTGTGATTACTGGGAAAAAGAAGGGTAAGAAGGGGAATCAGAAGGATTTTAAGGAAGAGAAGGGGGATGGTGAGGAGGAGGAAGTGCCGGAGGTTGTGTTTGCTGGGAAAAAGAAGTCGAAAGGGAAGAAGAGTGGTGCTGGTGGGAATGCTGGTTTTTCATCGTCCAATTTTGCCTTATTGGGAGGTGATGAGGATGATGATGGTAATGATGATGACGATGAGAGATCGGAATTGACTGGCGAGAAAGATAGCGAGGAGGAGGATGAGCCTGTGGCAAGTTTTAAAGGGAAGACAAAGGGTAAGGGGGATAAGGGGAGTGATGGTGGTAGTTTGTTTAGTGCATCGGCTTTTGATGCTATTGACGATGGTGAGATTGATGGAGAGGTAGTGGATAAAGAAGAGGATGATGATGACAATGACGTGCCTGTTATTGAATTTACAGGAAAGAAGAAGAAGTCGGCAAAGGGTGGTAAGAAGGATGCTGGGAGTGTGTTTTTGGCAGCGAGTTTCGATGGGTTAGATGAGAATGAGGATGACGAGAAGAAAGATGAGGATGAGGATTTTGGTGCGATTACTTTCTCTGGTAAGAAGAAGAAGTCTTCCAAGTCTAGCAAAAAGAGTGGTAGTAATAAATTTAGTGCGGCATTGCTTGATGATGAGAATGATGAAGAGACTTCTGTGTCTGAATCAGTGAAAACCAATGATGATGTGATTGGCGTTGAGGATGAAGATGAGTCGGTGGTTGCATTTACTGGTAAGAAGAAGAAGTCTTCTAAGAAGAAGGGGGCTAGTAATCATGTTTTTTCTGCATTGGGTGGAGAGGATGAGAGAGAAGTTGCTGAGATGGTTGAACCAGAAGAACCTAATATTGTCGAAGCTAATGATAGTAAGGTTACTAAGAGTGAAGCGGTGGCAGAGACTTCAAAGAATAAGAAGAAGAAGAAGGGTAAGAGTGGAAGGACTGCTCAAGAAGAGGATGATTTGGATAAGATTCTTGCGGAGCTAGGTGGGGGGGCATCTACTTTGAAACCTTCTGAATCACCTCCACAAGAGGAGAAACTTAATGTTCAGCCTGAACCAGTTGCAGTGCCAGATGCTCTGGTCGAGAAGGAGGGTGAAGAAGAAAAAGAAGAGTCTGCTGCTGCAAAGAAGAAGAAGAAGAAGAAAGAGAAGGAGAAAGAGAAGAAGGTAGCTGCTGCCGCTGCTGCAGCGGCAAAGGAAGAAAAGCTGGAAGAAGCAAAAGCTGAAACAAGTGAGCCAAAAAAGACAGATGCAAAGGGTAAAGCTGCTGAAAAGAAGCTTCCTAAGCATGTTAGAGAGATGCAAGAGGCACTTGCTAGGAGAAAAGAAATGGAGGAGAGAAAAGCAAAGGAGGAAGAGGAGAAGAGGAGGAAGGAAGAAGAGGAAAGACTAAGGCAAGAAGAACTTGAGAGGCAAGCAGAAGAGGCTAGGCGTAGGAAGAAGGAAAGGGAAAAGGAGAAACTCTTGAAGAAGAAACAGGAAGGCAAGCTTCTAACAGGGAAGCAGAAGGAAGAACAACGGCGGCTAGAGGCTATGCGGAATCAAATACTTGCTAATGCAGGCATCACTGTCCCTACTGCAGACAGAGATAATGCACCTACAAAACGGCCCAGGTACCAGACTAAGAAGTCAAAACCAGCTCACCATCAAGCAAATGGTATCAAGATAGAGGAACATGTAGAAGCTAAAGGAAAAGAGCAAGAGGAGCAGGAAGAAGTGCATGAGGTGGAAACCGTAGAATTAGAGAAGGCTGAACCAGTGGAGGAAGAGAAAACAGAAGTTGCTAGTGTACCTGAGGAGAATGGAATGGAGGAAGATGACGATGATGAGGAATGGGATGCAAAGAGCTGGGATGATGTAAATCTTAATGTTAAGGGTGCATTTGATGATGAGGAGGATTCTGAGCCTGAACCTGTCTTGAAGAAGGAAACAAAGAGTTCTGTTCCAGCTTCTCGCGGTGCAGCCCCTCCTTCAGATGCCAAGCCTGCAATTGCAGTCAGAAAACCTGTTACATCACAGCCAATGGATTCTCGTGATGTTGAAAATAAGAAAATTCAGACTGAGGTTGAAGTTTCTGACAAAAACAGGAAGAAAGACGCTGCTGTGAAAAATAAAGGAGCAGTTTCAGATGCCATCCCTAAACAGGGTGAAGAGAACCTGCGCTCTCCAATTTGCTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTGTTGGATTGTATTCGAGGCACCAATGTGCAAGAAGGTGAGGCTGGGGGTATCACGCAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGGGAAAGAACAAAGGAATTGAAAGCTGATGCAAAACTAAATGTCCCTGGTCTGTTGGTTATTGATACCCCTGGCCATGAATCTTTTACTAATCTACGGTCACGCGGTTCAGGTTTATGTGACATTGCTATTCTGGTTGTTGACATAATGCATGGCTTGGAGCCGCAAACCATAGAATCACTCAATCTTTTGAGGATGAGGAATACAGAATTTATTGTTGCATTAAATAAGGTGGACAGACTCTATGCATGGAAAGCACAACGTAATGCACCTATTAGAAAGGCATTGAAGCAGCAATCAAAAGATGTGCAAAATGAATTTGACAGGAGGCTCATGGAGGTCATAACTCAGTTCAAGGAGCAAGGATTAAATACTGAATTGTACTATAAAAACAAGGACATGGGAGAAACTTTTAATATCGTACCGACAAGTGCAATTAGTGGAGAAGGCATTCCTGATTTGTTACTGCTACTGATCCAATGGTCTCAGAAAACTATGATTGAGAAACTCACATTCAGAAATGAAGTGCAGTGTACGGTATTGGAGGTTAAGGTTATTGAAGGCCATGGAACAACAATTGATGTTGTGTTGGTTAATGGTGTGCTCCATGAAGGCGATCAAATCGTGGTGTGCGGCTTACAGGGTCCCATTGTTACCACAATTCGGGCTTTGCTGACACCCCACCCGATGAAGGAACTCCGAGTTAAGGGGACATATCTTCACCATAAAGAAATCAAGGCTGCACAGGGTATCAAGATCACTGGGCAGGGCCTTGAACATGCTATTGCTGGAACTGGTTTATATGTGGTTGGGCGTGATGATGATGTGGAAGATGTCAAGGAATCCGCAATGGAAGACATGAAGTCAGTAATGAGTCGGATTGATAAAACTGGCGAGGGAGTTTACGTACAAGCATCTACCCTTGGGTCACTGGAAGCATTGCTGGAGTTCTTGAAGTCACCGGCAGTAAGCATTCCTGTTAGCGGTATAGGCATTGGCCCAGTACATAAAAAGGATGTCATGAAGTCCAGTGTAATGCTTGAGAAGAAAAAGGAGTATGCCACCATTTTGGCATTTGATGTTAAAGTGACACCTGAGGCTCGGGAACTTGCAGATGAACTAGGAGTAAAGATTTTCATCGCTGATATCATTTATCACCTATTTGATCAATTCAAGGCTTACATTCAGAATCTGAAGGAGGAAAAGAAGAGGGAAGCCGCTGATGAAGCTGTTTTCCCATGTGTTCTTGAGATAATACCAGAGTGCATTTTCAACAAGAAAGATCCTATCATCTTGGGGGTTGATGTTCTTGAGGGCATACTCAAGGTTGGGACACCACTTTGTGTTCCACAAAAAGAATACATTGACATTGGCCGAATTGCTTCCATTGAGTTCAACAAAAAATCAGTGGATTATGCAAAGAAAGGCCAGAAGGTGGCCATTAAGATTGTGGGAACCAATGCGGAGGAGCAGCAAAAAATGCATGGCAGGCATTTTGACAACGAAGATCAACTAGTCAGCCACATTACAAGAAGGTCAATTGATATTCTTAAAGTTAATTACCGGGATGATCTGTCAATTGAAGATTGGAGGCTGGTTGTTAAATTGAAGACCCTTTTTAAGATACAGTAA
Protein:  
MGRKKPAARDEENAPAGGGGKSKKKGLMIDDDEYSVGTELSEETQVQEEKVVITGKKKGKKGNQKDFKEEKGDGEEEEVPEVVFAGKKKSKGKKSGAGGNAGFSSSNFALLGGDEDDDGNDDDDERSELTGEKDSEEEDEPVASFKGKTKGKGDKGSDGGSLFSASAFDAIDDGEIDGEVVDKEEDDDDNDVPVIEFTGKKKKSAKGGKKDAGSVFLAASFDGLDENEDDEKKDEDEDFGAITFSGKKKKSSKSSKKSGSNKFSAALLDDENDEETSVSESVKTNDDVIGVEDEDESVVAFTGKKKKSSKKKGASNHVFSALGGEDEREVAEMVEPEEPNIVEANDSKVTKSEAVAETSKNKKKKKGKSGRTAQEEDDLDKILAELGGGASTLKPSESPPQEEKLNVQPEPVAVPDALVEKEGEEEKEESAAAKKKKKKKEKEKEKKVAAAAAAAAKEEKLEEAKAETSEPKKTDAKGKAAEKKLPKHVREMQEALARRKEMEERKAKEEEEKRRKEEEERLRQEELERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQILANAGITVPTADRDNAPTKRPRYQTKKSKPAHHQANGIKIEEHVEAKGKEQEEQEEVHEVETVELEKAEPVEEEKTEVASVPEENGMEEDDDDEEWDAKSWDDVNLNVKGAFDDEEDSEPEPVLKKETKSSVPASRGAAPPSDAKPAIAVRKPVTSQPMDSRDVENKKIQTEVEVSDKNRKKDAAVKNKGAVSDAIPKQGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLNVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYAWKAQRNAPIRKALKQQSKDVQNEFDRRLMEVITQFKEQGLNTELYYKNKDMGETFNIVPTSAISGEGIPDLLLLLIQWSQKTMIEKLTFRNEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTGLYVVGRDDDVEDVKESAMEDMKSVMSRIDKTGEGVYVQASTLGSLEALLEFLKSPAVSIPVSGIGIGPVHKKDVMKSSVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIQNLKEEKKREAADEAVFPCVLEIIPECIFNKKDPIILGVDVLEGILKVGTPLCVPQKEYIDIGRIASIEFNKKSVDYAKKGQKVAIKIVGTNAEEQQKMHGRHFDNEDQLVSHITRRSIDILKVNYRDDLSIEDWRLVVKLKTLFKIQ